"Nikaido, M.,Kondo, S.,Zicong Zhang,Wu, J.,Nishihara, H.,Niimura, Y.,Suzuki, S.,Touhara K.,Suzuki, Y.,Noguchi, H.,Minakuchi, Y.,Toyoda, A.,Fujiyama, A.,Sugano, S.,Yoneda, M.,Kai, C.","Comparative genomic analyses illuminate the distinct evolution of megabats within Chiroptera",,"DNA Research",,"Vol. 27","Issue 4",,2020,Sept.
"Rei Kajitani,Dai Yoshimura,Miki Okuno,Yohei Minakuchi,Hiroshi Kagoshima,Asao Fujiyama,Kaoru Kubokawa,Yuji Kohara,Atsushi Toyoda,Takehiko Itoh","Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions",,"Nature Communications",,,,"  1702",2019,Apr.
"Atsushi Hoshino,Vasanthan Jayakumar,Eiji Nitasaka,Atsushi Toyoda,Hideki Noguchi,Takehiko Itoh,Tadasu Shin-I,Yohei Minakuchi,Yuki Koda,Atsushi J. Nagano,Masaki Yasugi,Mie N. Honjo,Hiroshi Kudoh,Motoaki Seki,Asako Kamiya,Toshiyuki Shiraki,Piero Carninci,Erika Asamizu,Hiroyo Nishide,Sachiko Tanaka,Kyeung-Il Park,Yasumasa Morita,Kohei Yokoyama,Ikuo Uchiyama,Yoshikazu Tanaka,Satoshi Tabata,Kazuo Shinozaki,Yoshihide Hayashizaki,Yuji Kohara,Yutaka Suzuki,Sumio Sugano,Asao Fujiyama,Shigeru Iida,Yasubumi Sakakibara","Genome sequence and analysis of the Japanese morning glory Ipomoea nil",,"Nature Communications",,"Vol. 7",,,2016,Nov.
"Hideki Nishikawa,Takuro Iijima,Rei Kajitani,Junichi Yamaguchi,Toshiya Ando,Yutaka Suzuki,Sumio Sugano,Asao Fujiyama,Shunichi Kosugi,Hideki Hirakawa,Satoshi Tabata,Katsuhisa Ozaki,Hiroya Morimoto,Kunio Ihara,Madoka Obara,Hiroshi Hori,Takehiko Itoh,Haruhiko Fujiwara","A genetic mechanism for female-limited Batesian mimicry in Papilio butterfly",,"Nature Genetics",,"Vol. 47","No. 4","pp. 405-409",2015,Apr.
"Hideko Urushihara,Hidekazu Kuwayama,Kensuke Fukuhara,Takehiko Itoh,Hiroshi Kagoshima,Tadasu Shin-I,Atsushi Toyoda,Kazuyo Ohishi,Tateaki Taniguchi,Hideki Noguchi,Yoko Kuroki,Takashi Hata,Kyoko Uchi,Kurato Mohri,Jason S King,Robert H Insall,Yuji Kohara,Asao Fujiyama","Comparative genome and transcriptome analyses of the social amoeba Acytostelium subglobosum that accomplishes multicellular development without germ-soma differentiation",,"Bmc Genomics",,"Vol. 16",,,2015,Feb.
"Rei Kajitani,Kouta Toshimoto,Hideki Noguchi,Atsushi Toyoda,Yoshitoshi Ogura,Miki Okuno,Mitsuru Yabana,Masayuki Harada,Eiji Nagayasu,Haruhiko Maruyama,Yuji Kohara,Asao Fujiyama,Tetsuya Hayashi,Takehiko Itoh","Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads",,"Genome Research",,"Vol. 24","No. 8","pp. 1384-1395",2014,Aug.
"Mikihiko Kawai,Taiki Futagami,Atsushi Toyoda,Yoshihiro Takaki,Shinro Nishi,Sayaka Hori,Wataru Arai,Taishi Tsubouchi,Yuki Morono,Ikuo Uchiyama,Takehiko Itoh,Asao Fujiyama,Fumio Inagaki,Hideto Takami","High frequency of phylogenetically diverse reductive dehalogenase-homologous genes in deep subseafloor sedimentary metagenomes",,"Frontiers in Microbiology",,"Vol. 5",,,2014,Mar.
"Masato Nikaido,Hideki Noguchi,Atsushi Toyoda,Yutaka Suzuki,Rei Kajitani,Hikoyuu Suzuki,Miki Okuno,Mitsuto Aibara,Benjamin P. Ngatunga,Semvua Mzighani,Hassan W.J. Kalombo,Kawilarang W.A. Masengi,Josef Tuda,Sadao Nogami,Ryuichiro Maeda,Masamitsu Iwata,Yoshitaka Abe,KOJI FUJIMURA,Masataka Okabe,Takanori Amano,Akiteru Maeno,Toshihiko Shiroishi,Sumio Sugano,Yuji Kohara,Asao Fujiyama,NORIHIRO OKADA","Coelacanth genomes reveal signatures for evolutionary transition from water to land",,"Genome Research","Cold Spring Harbor Laboratory Press","Vol. 23","No. 10","pp. 1740-1748",2013,Oct.
"Taejoon Kwon,Shuji Takahashi,Toshiaki Tanaka,Hideki Noguchi,Atsushi Toyoda,Asao Fujiyama,Yutaka Suzuki,Naoto Ueno,Masanori Taira,John B. Wallingford,Edward M. Marcotte","What we can do with over 300 billion bases of RNA-seq data: The case of Xenopus laevis genome project","International Symposium on Genome Science",,,,,,2013,Jan.
"Satoshi Kobayashi,Taeko Komoda,Jiro Araki,Takeaki Taniguchi,Takehiko Ito,Keiichi Kuma,Asao Fujiyama","Trait of "Genome Viewer" that can promptly retrieve homologous gene",,"Genes & Genetic Systems",,"Vol. 84","No. 6","pp. 449",2009,Dec.
"Todd D.  Taylor,Hideki Noguchi,Yasushi Totoki,Yoko Kuroki,Ken Dewar,Christine Lloyd,Tadayuki Takeda,Dae-Won Kim,Xinwei She,Karen F. Barlow,Toby Bloom,Elspeth Bruford,Jean L. Chang,Christina A. Cuomo,Evan Eichler,Michael G. FitzGerald,David B. Jaffe,LaButti Kurt,Robert Nicol,Hong-Seog Park,Christopher Seaman,Carrie Sougnez,Xiaoping Yang,Andrew R. Zimmer,Michael C. Zody,Bruce W. Birren,Chad Nusbaum,Asao Fujiyama,Masahira Hattori,Jane Rogers,Eric S. Lander,yoshiyuki sakaki","Human chromosome 11 DNA sequence and analysis including novel gene identification",,"Nature","Nature Publishing Group","  440","  7083","  497-500",2006,Mar.