@article{CTT100917046,
  author = {Kazuki Takakashi and Hirokazu Kuwahara and Yutaro Horikawa and Kazuki Izawa and Daiki Kato and Tatsuya Inagaki and Masahiro Yuki and Moriya Ohkuma and Yuichi Hongoh},
  title = {Emergence of putative energy parasites within Clostridia revealed by genome analysis of a novel endosymbiotic clade},
  journal = {The ISME Journal},
  year = 2023,
}

@article{CTT100892468,
  author = {Hirohito Aoki and Masahiro Yuki and Yuichi Hongoh and Yutaka YAMAGATA and Moriya Ohkuma},
  title = {Agarose gel microcapsules enable easy-to-prepare, picolitre-scale, single-cell genomics, yielding high-coverage genome sequence},
  journal = {Scientific Reports},
  year = 2022,
}

@article{CTT100911795,
  author = {Yuniar Devi Utami and Hirokazu Kuwahara and Katsura Igai and Takumi Murakami and Kaito Sugaya and Takahiro Morikawa and Yuichi Nagura and Masahiro Yuki and Pinsurang Deevong and Tetsushi Inoue and Kumiko Kihara and Nathan Lo and Akinori Yamada and Moriya Ohkuma and Yuichi Hongoh},
  title = {Genome analyses of uncultured TG2/ZB3 bacteria in ‘Margulisbacteria’ specifically attached to ectosymbiotic spirochetes of protists in the termite gut},
  journal = {The ISME Journal},
  year = 2019,
}

@article{CTT100780874,
  author = {Yuniar Devi Utami and Hirokazu Kuwahara and Takumi Murakami and Takahiro Morikawa and Kaito Sugaya and Kumiko Kihara and Masahiro Yuki and Nathan Lo and Pinsurang Deevong and Sasitorn Hasin and Warin Boonriam and Tetsushi Inoue and Akinori Yamada and Moriya Ohkuma and Yuichi Hongoh},
  title = {Phylogenetic diversity and single-cell genome analysis of "Melainabacteria", a non-photosynthetic cyanobacterial group, in the termite gut},
  journal = {Microbes and Envitonments},
  year = 2018,
}

@article{CTT100780869,
  author = {Masahiro Yuki and Mitsuo Sakamoto and Hirokazu Kuwahara and Yuichi Hongoh and Moriya Ohkuma},
  title = {Draft genome sequence of Lactococcus sp. strain Rs-Y01, isolated from the gut of the lower termite Reticulitermes speratus},
  journal = {Genome Announcements},
  year = 2017,
}

@article{CTT100744193,
  author = {Kuwahara H. and Yuki M. and Izawa K. and Ohkuma M. and Hongoh Y.},
  title = {Genome of ‘Ca. Desulfovibrio trichonymphae’, an H2-oxidizing bacterium in a tripartite symbiotic system within a protist cell in the termite gut},
  journal = {The ISME Journal},
  year = 2017,
}

@article{CTT100786547,
  author = {Kazuki Izawa and Hirokazu Kuwahara and Kumiko Kihara and Masahiro Yuki and Nathan Lo and Takehiko Itoh and Moriya Ohkuma and Yuichi Hongoh},
  title = {Comparison of Intracellular "Ca. Endomicrobium Trichonymphae" Genomovars Illuminates the Requirement and Decay of Defense Systems against Foreign DNA},
  journal = {Genome biology and evolution},
  year = 2016,
}

@article{CTT100736093,
  author = {Kazuki Izawa and Hirokazu Kuwahara and Kumiko Kihara and Masahiro Yuki and Nathan Lo and Moriya Ohkuma and Yuichi Hongoh},
  title = {Comparison of intracellular “Ca. Endomicrobium trichonymphae” genomovars illuminates the requirement and decay of defense systems against foreign DNA},
  journal = {Genome Biology and Evolution},
  year = 2016,
}

@article{CTT100714120,
  author = {Masahiro Yuki and Hirokazu Kuwahara and Masaki Shintani and Kazuki Izawa and Tomoyuki Sato and David Starns and Yuichi Hongoh and Moriya Ohkuma},
  title = {Dominant ectosymbiotic bacteria of cellulolytic protists in the termite gut also have the potential to digest lignocellulose},
  journal = {Environmental Microbiology},
  year = 2015,
}

@article{CTT100714097,
  author = {Moriya Ohkuma and Satoko Noda and Satoshi Hattori and Toshiya Iida and Masahiro Yuki and David Starns and Jun-Ichi Inoue and Alistair C.  Darby and Yuichi Hongoh},
  title = {Acetogenesis from H2 plus CO2 and nitrogen fixation by an endosymbiotic spirochete of a termite-gut cellulolytic protist.},
  journal = {Proceedings of the National Academy of Sciences of the United States of America},
  year = 2015,
}

@article{CTT100714288,
  author = {Toshiaki Kudo and Kazuaki  Sakamoto and Masashi Akinaga and Ayumi Kawauchi and Tomomi  Nakahara and Xiaochi  Zhang and Akinori Yamada and Kenshiro Ohshima and Wataru Suda and Hirokazu Kuwahara and Nobuyuki Nakamura and Yuichi Nogi and Keiko KItamura and Masahiro Yuki and Toshiya Iida and Shigeharu Moriya and Tetsushi Inoue and Yuichi Hongoh and Masahira Hattori and Moriya Ohkuma},
  title = {Draft genome sequences of cyclodextrin-producing alkaliphilic Bacillus strains JCM 19045, JCM 19046, and JCM 19047},
  journal = {},
  year = 2014,
}

@inproceedings{CTT100917110,
  author = {Kazuki Takahashi and Hirokazu Kuwahara and Yuutarou Horikawa and Kazuki Izawa and Tatsuya Inagaki and Masahiro Yuki and Moriya Ohkuma and Yuichi Hongoh},
  title = {Discovery and evolution of obligately-intracellular parasites belonging to the class Clostridia},
  booktitle = {},
  year = 2023,
}

@inproceedings{CTT100916624,
  author = {大須賀奨 and 高橋一樹 and 猪飼桂 and 雪真弘 and 清水美智留 and 桑原宏和 and 村上匠 and 大熊盛也 and 本郷裕一},
  title = {シロアリ腸内原生生物に細胞内共生するPlanctomycetota 門細菌の発見とゲノム解析},
  booktitle = {},
  year = 2023,
}

@inproceedings{CTT100916620,
  author = {板垣優大 and 高橋一樹 and 雪真弘 and 清水美智留 and 村上匠 and 大熊盛也 and 本郷裕一},
  title = {シロアリ腸内で優占するBetaproteobacteria綱細菌の1細胞ゲノム解析},
  booktitle = {},
  year = 2023,
}

@inproceedings{CTT100917103,
  author = {髙橋一樹 and 桑原宏和 and 堀川雄太郎 and 伊澤和輝 and 加藤大貴 and 稲垣辰哉 and 雪真弘 and 大熊盛也 and 本郷裕一},
  title = {細胞内寄生性クロストリディア綱細菌の発見と寄生体進化プロセスの解明},
  booktitle = {},
  year = 2023,
}

@inproceedings{CTT100892482,
  author = {Kazuki Takahashi and Hirokazu Kuwahara and Yuutarou Horikawa and Kazuki Izawa and Tatsuya Inagaki and Masahiro Yuki and Moriya Ohkuma and Yuichi Hongoh},
  title = {Parasitic lifestyle and genome evolution of novel endosymbiotic clostridia of the protists inhabiting the termite gut},
  booktitle = {},
  year = 2023,
}

@inproceedings{CTT100780841,
  author = {Yuniar Devi Utami and Hirokazu Kuwahara and Katsura Igai and Takumi Murakami and Takahiro Morikawa and Kaito Sugaya and Masahiro Yuki and Akinori Yamada and Moriya Ohkuma and Yuichi Hongoh},
  title = {Genome analyses of uncultured ZB3/TG2 bacteria (“Margulisbacteria”) attached to ectosymbiotic spirochetes of protist cells in the termite gut},
  booktitle = {},
  year = 2018,
}

@inproceedings{CTT100780819,
  author = {ウタミ ユニア デビ and 桑原宏和 and 村上匠 and 猪飼桂 and 守川貴裕 and 菅谷快斗 and 雪真弘 and 山田明徳 and 大熊盛也 and 本郷裕一},
  title = {Genome analyses of non-photosynthetic cyanobacteria associated with protist cells in the termite gut},
  booktitle = {},
  year = 2018,
}

@inproceedings{CTT100727040,
  author = {桑原宏和 and 雪真弘 and 伊澤和輝 and 大熊盛也 and 本郷裕一},
  title = {シロアリ腸内原生生物に共生するDesulfovibrio属細菌のゲノム解析による3者間共生システムの解明},
  booktitle = {},
  year = 2016,
}

@inproceedings{CTT100727027,
  author = {Yuniar Devi Utami and Hirokazu Kuwahara and Kaito Sugaya and Masahiro Yuki and Moriya Ohkuma and Yuichi Hongoh},
  title = {Uncovering rare candidate bacterial phylum TG2 in the termite gut},
  booktitle = {},
  year = 2016,
}

@inproceedings{CTT100727030,
  author = {伊澤和輝 and 麥島雄太 and 桑原宏和 and 河合幹彦 and 木原久美子 and Nathan Lo and 雪真弘 and 伊藤武彦 and 大熊盛也 and 本郷裕一},
  title = {対ファージ防衛機構が示すEndomicrobium属細胞内共生細菌の適応進化},
  booktitle = {},
  year = 2016,
}